BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C02LP1|AL425997
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1539 1587 0.0
>3x_Contig1539
Length = 11016
Score = 1587 bits (800), Expect = 0.0
Identities = 804/806 (99%)
Strand = Plus / Plus
Query: 1 gatcatcatatggacaaactttaactatagtgtcacttagaacccttgaggattgctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9828 gatcatcatatggacaaactttaactatagtgtcacttagaacccttgaggattgctaac 9887
Query: 61 actgtaaaaagggttcatctgttaagatactgttgtgtcaatactagacttatcatatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9888 actgtaaaaagggttcatctgttaagatactgttgtgtcaatactagacttatcatatac 9947
Query: 121 agtaaaatcggttgagagccaattttcgtggatagatcaaattatagatccattttggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9948 agtaaaatcggttgagagccaattttcgtggatagatcaaattatagatccattttggct 10007
Query: 181 attctcaattgaaagtaacgaataaagagttgggttaagtcattcccgtgccaaatattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10008 attctcaattgaaagtaacgaataaagagttgggttaagtcattcccgtgccaaatattt 10067
Query: 241 attcgattggtggctgatcctctactataaacyaattttatttttacctctcggtttcta 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 10068 attcgattggtggctgatcctctactataaactaattttatttttacctctcggtttcta 10127
Query: 301 ttacactgtgaacggattttctcggtggcctgcttctattccccataattttctggcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10128 ttacactgtgaacggattttctcggtggcctgcttctattccccataattttctggcttt 10187
Query: 361 gaaactctttcgtttgatttatttaacctttcaatggatcagcagaggatcacacagcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10188 gaaactctttcgtttgatttatttaacctttcaatggatcagcagaggatcacacagcag 10247
Query: 421 actcctcaatggagcatacagagcggtgccagtgcacgtgctatgaaaagtgcgtcgcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10248 actcctcaatggagcatacagagcggtgccagtgcacgtgctatgaaaagtgcgtcgcat 10307
Query: 481 gccaggcttacgaataaccagcaacagctggaaatcgaatacaagaccatgaaacaggaa 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10308 gctaggcttacgaataaccagcaacagctggaaatcgaatacaagaccatgaaacaggaa 10367
Query: 541 aatgctaagttgaaagaggttataacgacgttaaagcaagaaattgacttatattccaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10368 aatgctaagttgaaagaggttataacgacgttaaagcaagaaattgacttatattccaga 10427
Query: 601 gtaatgtcgaggaattcttctcaggttggtcctactacggcaacgataccgctgcagatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10428 gtaatgtcgaggaattcttctcaggttggtcctactacggcaacgataccgctgcagatg 10487
Query: 661 gaaaccttacttgtgaatccaaaacgtaggaaaactatgtgtttgggaagcagtattaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10488 gaaaccttacttgtgaatccaaaacgtaggaaaactatgtgtttgggaagcagtattaaa 10547
Query: 721 ccttgaagcatttcctggctttttttttttgtgttccatatttatccggtagtttccttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10548 ccttgaagcatttcctggctttttttttttgtgttccatatttatccggtagtttccttc 10607
Query: 781 actaggaagctgtctttccacaatcc 806
||||||||||||||||||||||||||
Sbjct: 10608 actaggaagctgtctttccacaatcc 10633
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,464
Number of Sequences: 1807
Number of extensions: 10464
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)